euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

130 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip3193 chr1 105028221 105028221 + unknown germline . no 252 .
srip4136 chr1 149308428 149308428 + unknown germline . no 252 LOC645262
srip5422 chr1 179575369 179575369 - unknown germline . no 252 TDRD5
srip6848 chr1 221827812 221827812 - unknown germline . no 252 .
srip7081 chr1 231007802 231007802 . unknown germline . no 252 .
srip7556 chr10 4137263 4137263 + unknown germline . no 252 .
srip7830 chr10 19065791 19065791 - unknown germline . no 252 .
srip8107 chr10 23842050 23842050 - unknown germline . no 252 .
srip8451 chr10 25707693 25707693 - unknown germline . no 252 GPR158
srip8831 chr10 42531995 42531995 . unknown germline . no 252 .
srip9540 chr10 68803690 68803690 + unknown germline . no 252 LRRTM3;CTNNA3
srip11828 chr10 124455224 124455224 + unknown germline . no 252 .
srip12801 chr11 25123346 25123346 - unknown germline . no 252 .
srip13827 chr11 33670130 33670130 + unknown germline . no 252 C11orf41
srip15389 chr11 58171843 58171843 + unknown germline . no 252 .
srip17169 chr11 94684368 94684368 + unknown germline . no 252 .
srip18480 chr11 123241793 123241793 + unknown germline . no 252 .
srip18629 chr11 129530922 129530922 + unknown germline . no 252 .
srip19248 chr11 134305645 134305645 - unknown germline . no 252 .
srip20134 chr12 12933687 12933687 - unknown germline . no 252 APOLD1
srip22232 chr12 43256979 43256979 - unknown germline . no 252 .
srip22804 chr12 48929045 48929045 + unknown germline . no 252 .
srip22854 chr12 49106382 49106382 + unknown germline . no 252 CCNT1
srip22870 chr12 51827665 51827665 . unknown germline . no 252 SLC4A8
srip23143 chr12 66451383 66451383 . unknown germline . no 252 .
srip26366 chr12 126802931 126802931 - unknown germline . no 252 .
srip27368 chr13 27488117 27488117 + unknown germline . no 252 .
srip30638 chr13 78693217 78693217 + unknown germline . no 252 .
srip31566 chr13 85871605 85871605 - unknown germline . no 252 .
srip31980 chr13 86340151 86340151 - unknown germline . no 252 .
srip33543 chr13 104296230 104296230 - unknown germline . no 252 .
srip34294 chr14 19036724 19036724 + unknown germline . no 252 .
srip35870 chr14 36674752 36674752 + unknown germline . no 252 .
srip38141 chr14 71197789 71197789 + unknown germline . no 252 MAP3K9
srip39526 chr15 34031845 34031845 - unknown germline . no 252 RYR3
srip42521 chr15 83551628 83551628 - unknown germline . no 252 HOMER2
srip43263 chr15 100931152 100931152 - unknown germline . no 252 .
srip46313 chr16 71028016 71028016 + unknown germline . no 252 HYDIN
srip46524 chr17 4314989 4314989 - unknown germline . no 252 .
srip46827 chr17 15511186 15511186 + unknown germline . no 252 CDRT1
srip47019 chr17 25303557 25303557 + unknown germline . no 252 .
srip48358 chr17 68357404 68357404 + unknown germline . no 252 .
srip50022 chr18 49216225 49216225 - unknown germline . no 252 .
srip50425 chr18 51739062 51739062 + unknown germline . no 252 MBD2
srip51097 chr18 60730926 60730926 . unknown germline . no 252 .
srip51837 chr18 74960069 74960069 - unknown germline . no 252 .
srip52346 chr19 29223828 29223828 . unknown germline . no 252 .
srip52760 chr2 6798283 6798283 - unknown germline . no 252 .
srip53089 chr2 20076851 20076851 + unknown germline . no 252 FLJ12334
srip53479 chr2 23191008 23191008 - unknown germline . no 252 .
srip53930 chr2 35879354 35879354 + unknown germline . no 252 .
srip54269 chr2 36570259 36570259 - unknown germline . no 252 .
srip56219 chr2 82098035 82098035 + unknown germline . no 252 .
srip56871 chr2 106163161 106163161 + unknown germline . no 252 .
srip57850 chr2 133028941 133028941 . unknown germline . no 252 .
srip57903 chr2 137426137 137426137 - unknown germline . no 252 .
srip59885 chr2 173854105 173854105 - unknown germline . no 252 RAPGEF4
srip60533 chr2 181000547 181000547 + unknown germline . no 252 .
srip62668 chr2 238252189 238252189 . unknown germline . no 252 COL6A3
srip63474 chr20 16479499 16479499 . unknown germline . no 252 KIF16B
srip64762 chr20 41952105 41952105 - unknown germline . no 252 .
srip65869 chr21 19517305 19517305 - unknown germline . no 252 .
srip67840 chr22 22715594 22715594 + unknown germline . no 252 IGL@
srip68753 chr22 44324597 44324597 - unknown germline . no 252 PNPLA3
srip70455 chr3 20748898 20748898 - unknown germline . no 252 .
srip71894 chr3 38626071 38626071 + unknown germline . no 252 SCN5A
srip75576 chr3 85576556 85576556 + unknown germline . no 252 CADM2
srip75849 chr3 88353544 88353544 + unknown germline . no 252 .
srip78644 chr3 151148549 151148549 - unknown germline . no 252 MED12L
srip80028 chr3 173917220 173917220 - unknown germline . no 252 NLGN1
srip80231 chr3 175677977 175677977 - unknown germline . no 252 .
srip80340 chr3 176091323 176091323 + unknown germline . no 252 .
srip81752 chr3 188234425 188234425 + unknown germline . no 252 LPP
srip83002 chr4 18162684 18162684 . unknown germline . no 252 .
srip83231 chr4 18194352 18194352 - unknown germline . no 252 .
srip83849 chr4 29321856 29321856 + unknown germline . no 252 .
srip84718 chr4 47007787 47007787 - unknown germline . no 252 .
srip85384 chr4 57497060 57497060 - unknown germline . no 252 .
srip85493 chr4 58126670 58126670 - unknown germline . no 252 .
srip86179 chr4 66413931 66413931 + unknown germline . no 252 EPHA5
srip87683 chr4 82515393 82515393 . unknown germline . no 252 .
srip89682 chr4 111271156 111271156 - unknown germline . no 252 .
srip90337 chr4 115132699 115132699 + unknown germline . no 252 .
srip92199 chr4 134596423 134596423 + unknown germline . no 252 .
srip92545 chr4 138177320 138177320 + unknown germline . no 252 .
srip96082 chr5 8749521 8749521 + unknown germline . no 252 .
srip97752 chr5 33633341 33633341 - unknown germline . no 252 ADAMTS12
srip98361 chr5 41602035 41602035 + unknown germline . no 252 .
srip100730 chr5 89450775 89450775 + unknown germline . no 252 .
srip102742 chr5 112703074 112703074 + unknown germline . no 252 MCC
srip104865 chr5 154873936 154873936 - unknown germline . no 252 .
srip105254 chr5 155619871 155619871 + unknown germline . no 252 .
srip105738 chr5 160435674 160435674 - unknown germline . no 252 .
srip108722 chr6 46310300 46310300 + unknown germline . no 252 .
srip109539 chr6 63368206 63368206 + unknown germline . no 252 .
srip112687 chr6 102283763 102283763 - unknown germline . no 252 GRIK2
srip113796 chr6 142450104 142450104 - unknown germline . no 252 .
srip114755 chr6 148195798 148195798 + unknown germline . no 252 .
srip115201 chr6 160521764 160521764 - unknown germline . no 252 IGF2R
srip115695 chr6 162181262 162181262 + unknown germline . no 252 PARK2
srip116063 chr7 5787402 5787402 + unknown germline . no 252 RNF216
srip116295 chr7 17094707 17094707 + unknown germline . no 252 .
srip117452 chr7 52789459 52789459 + unknown germline . no 252 .
srip117626 chr7 53652509 53652509 - unknown germline . no 252 .
srip118299 chr7 62492938 62492938 + unknown germline . no 252 .
srip118507 chr7 66591179 66591179 - unknown germline . no 252 TYW1
srip119832 chr7 84901724 84901724 - unknown germline . no 252 .
srip121091 chr7 105741898 105741898 - unknown germline . no 252 SYPL1
srip121737 chr7 107829256 107829256 + unknown germline . no 252 NRCAM
srip122023 chr7 108325670 108325670 + unknown germline . no 252 .
srip124393 chr8 5829282 5829282 - unknown germline . no 252 .
srip125815 chr8 43095092 43095092 . unknown germline . no 252 .
srip126957 chr8 70106472 70106472 + unknown germline . no 252 .
srip127452 chr8 72399228 72399228 - unknown germline . no 252 .
srip128287 chr8 87315042 87315042 + unknown germline . no 252 .
srip131070 chr9 6290487 6290487 + unknown germline . no 252 .
srip131373 chr9 7741401 7741401 + unknown germline . no 252 .
srip132933 chr9 32092758 32092758 - unknown germline . no 252 .
srip133407 chr9 32463891 32463891 - unknown germline . no 252 DDX58
srip133649 chr9 34904794 34904794 - unknown germline . no 252 .
srip134038 chr9 74904917 74904917 - unknown germline . no 252 .
srip135881 chr9 118083873 118083873 - unknown germline . no 252 DEC1
srip136502 chrX 14152007 14152007 - unknown germline . no 252 .
srip137248 chrX 54917144 54917144 + unknown germline . no 252 .
srip137577 chrX 55585154 55585154 - unknown germline . no 252 .
srip140092 chrX 102363185 102363185 + unknown germline . no 252 .
srip140529 chrX 116025284 116025284 + unknown germline . no 252 .
srip140813 chrX 119892837 119892837 - unknown germline . no 252 .
srip141060 chrX 122664864 122664864 - unknown germline . no 252 .
srip141369 chrX 129525275 129525275 - unknown germline . no 252 .